#! /bin/sh

LIST=`cut -c1-6 cty_chr.txt`

for i in $LIST
  do 
    cut -f$i -d, cty_sub_big.dat > chr/$i.dat
  done

(cd chr; sed -e s/-// 5.dat > tmp.dat; mv -f tmp.dat 5.dat)
(cd chr; make)
(cd chr; chr_481; mv -f tmp.dat 481.dat)


for i in $LIST
  do 
    chr/chr_frq < chr/$i.dat > chr/$i.frq
  done


for i in $LIST
  do 
    chr/chr_max < chr/$i.dat > chr/$i.max
  done

(cd chr; make veryclean)